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Understanding the cellular ecosystems that shape human disease

We are a systems biology and precision medicine research group investigating how cellular interactions, molecular signalling, and tissue architecture shape cancer biology and therapeutic response.



Latest News

“To provide a more integrated approach to informing future precision medicine strategies, we combined the complementary strengths of multiple technological platforms to profile multi-regional, spatially annotated surgical biospecimens from 65 RCC patients by single-cell RNA sequencing with paired TCR and BCR repertoire analysis, imaging mass cytometry, suspension mass cytometry, spatial transcriptomics and deconvolved bulk RNA sequencing. With this resource dataset, we explored patient subgroups and precision immunotherapy strategies using an integrated analysis of transcripts and proteins across single cell and spatial modalities.”
Read more at:
https://doi.org/10.64898/2026.08.17.744644

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Our Research

As part of the Pancreatic Cancer Translational Research Initiative at the Ontario Institute of Cancer Research, we are studying how intra- and inter-tumour cellular heterogeneity contributes to therapeutic resistance and poor outcomes in Pancreatic Ductal AdenoCarcinoma. By utilizing serial sections on a large cohort to simultaneously quantify single cell phenotypes and markers of their functional state, as well as their interactions, overall organization, and contribution to tissue architecture, we are able to identify multi-cellular networks that can inform clinical decision making like never done before. This work has been a vital collaboration between our graduate students, Ferris, Sybil, Tiak, and post doctoral fellow, Noor.
https://oicr.on.ca/programs/pancreatic-cancer-translational-research-initiative-pancurx/

By pairing mouse models of mammary tumorigenesis and highly multiplexed cellular profiling of human breast cancers we are investigating the molecular pathways which drive breast cancer initiation and metastasis. For this purpose, we are working closely with scientific collaborators within the Lunenfeld Tanenbaum Researcher Institute and the clinical teams who have created the Breast Translational Research Resource at Mount Sinai Hospital. And as part of the Terry Fox Research Institute Hippo Pathway Team, we have developed a spatially resolved functional genomics screening approach to dissect the extracellular signaling networks controlled by tumour-specific Hippo signaling. This work is spear headed by our post doctoral fellow, Eddy.

We develop spatially resolved systems biology tools and analysis methods to quantify complex tissue systems across various biological scales; from genomes to pathway specific signaling, and even how these influence cellular phenotype and tissue level patterning. With specific expertise in Imaging Mass Cytometry and CyTOF technology, we combine spatially resolved ‘omics’ methods to investigate the molecular underpinnings of classic histopathology and unravel the complexity of tumour morphology and architecture. We are continually improving the quantitative methods we use, developing new reagents to measure cellular function, and creating new functional and phenotypic screening approaches. Join our lab to find out more and get involved with the ever-evolving field.

Courtesy of Jenn Gorman
Courtesy of Jenn Gorman
Courtesy of Jenn Gorman
Courtesy of Eddy Chen
Courtesy of Jenn Gorman
Courtesy of Jenn Gorman
Courtesy of Jenn Gorman
Courtesy of Jenn Gorman
Courtesy of Jenn Gorman

With thanks to all of our funding sources for their generous support of our work.


Publications

Multimodal cell communication networks nominate immunotherapies for RCC subgroups with discrete T cell recruitment or expansion
Pfeil et al. bioRxiv. (2026)
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Rakaia: interactive discovery of spatial biology at scale
An interactive platform for visualization, annotation, and analysis of highly multiplexed tissue imaging data.
Watson et al. bioRxiv. (2025)
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Integrated spatial proteomics of human PDAC uncovers an expanded tumour-immune-stroma spectrum with genomic associations
Shakfa et al. bioRxiv. (2025)
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The single-cell pathology landscape of breast cancer
Jackson et al. Nature. (2020)
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Imaging mass cytometry and multiplatform genomics define the phenogenomic landscape of breast cancer
Ali et al. Nat Cancer. (2020)
Read Publication


The People Behind the Science

Hartland Jackson, PhD
Principal Investigator
hjackson@lunenfeld.ca

Beth Sunnucks
Lab Manager
sunnucks@lunenfeld.ca

Katie Teng
Graduate Student
kteng@lunenfeld.ca

Eddy Chen, PhD
Post Doctoral Fellow
echen@lunenfeld.ca

Noor Shakfa, PhD
Post Doctoral Fellow
nshakfa@lunenfeld.ca

Sibyl Drissler
Graduate Student
sdrissler@lunenfeld.ca

Asma Amamou, PhD
Post Doctoral Fellow

Ezi Ejiofor
Graduate Student

Jennifer Gorman, PhD
Research Manager and
Scientific Associate
gorman@lunenfeld.ca

Matt Watson
Computational Scientist
mwatson@lunenfeld.ca

Ching Yeung Lam
Graduate Student
chingyeung@lunenfeld.ca

Darren Chan
Graduate Student
dchan@lunenfeld.ca

Tiak Tan
Graduate Student
tiaktan@lunenfeld.ca

Isabelle Hébert-Milette, PhD
Post Doctoral Fellow
hebert-milette@lunenfeld.ca

Alec Luchak, PhD
Post Doctoral Fellow

Avi DasGupta
Graduate Student

Pearl Sequeira
Research Administration
sequeira@lunenfeld.ca

Lucy Colley
Technician

Ferris Nowlan
Graduate Student
fnowlan@lunenfeld.ca

Golnaz Abazari
Graduate Student
gabazari@lunenfeld.ca

Jennifer Pfeil
Graduate Student
jpfeil@lunenfeld.ca

Matthew Perrone, PhD
Post Doctoral Fellow
mperrone@lunenfeld.ca

Yufei Zhang
Graduate Student

Simon Latour, PhD
Post Doctoral Fellow

Taylor Larsen
Summer Research Student

Deni van Schie
Graduate Student

Anuroopa Dinesh
Lab Manager and
Research Technician

Ricardo Gonzalez, MD, PhD
Pathologist

Keiran Pace
Summer Research Student

Ari Forman
Graduate Student

Phoebe Ji
Summer Research Student

Somi Afiuni, PhD
Computational Scientist

Kellyona Khounborind
Summer Research Student

Naila Abid
Graduate Student

We are a highly collaborative team with many partnerships within the institute as well as with other labs across Toronto and beyond.

  • We are developing new analysis methods for image cytometry and highly multiplexed imaging with the Campbell Lab at the Lunenfeld Tanenbaum Research Institute. https://www.camlab.ca/
  • With the neighbouring Schramek Lab at LTRI we have created mouse model systems for the functional genomics study of single cells and multi-cellular tissues. https://schramek.lunenfeld.ca/
  • Alongside the Notta Lab and the PanCuRx Initiative within the Ontario Institute for Cancer Research, we are investigating the single cell content of pancreatic ductal adenocarcinoma using a combination of ‘omics’ profiling methods. https://www.nottalab.com/
  • In collaboration with the McGuigan Lab in BioEngineering at the University of Toronto, we are engineering multi-cellular tissue environments at scale. http://www.mcguiganlab.com/
  • Working to develop new reagents for CyTOF and Imaging Mass Cytometry we work closely with the Nitz Lab in the Department of Chemistry at the University of Toronto. https://sites.chem.utoronto.ca/nitz/
Inside the Lab
Beyond the Bench
Jackson and Campbell lab members

Even though our lab is currently close to capacity we are still always looking for creative and enthusiastic scientists to join our team. In particular, we are looking to recruit talented post-doctoral fellows who believe they would have a unique skill set to contribute to our lab. If you have scientific research goals that you believe will align with ours, please contact Dr. Hartland Jackson directly to discuss your work and future interests.


Connect With Us

We are located at:

Lunenfeld-Tanenbaum Research Institute
Mount Sinai Hospital
Joseph & Wolf Lebovic Health Complex

Room 881 - 600 University Avenue
Toronto, Ontario Canada M5G 1X5
(416) 586-4800 x 8267